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UT-ORNL-KBRIN Bioinformatics
Summit 2010

March 19 – 21, 2010
Lake Barkley State Resort Park
Cadiz, KY

Jointly Sponsored by the UTHSC Center of Genomics & Bioinformatics, t he UT/ORNL Science Alliance, the UT Molecular Resource Center, the UT Innovative Computing Laboratory and the Kentucky Biomedical Research Infrastructure Network

2010 PRE-SUMMIT KENTUCKY BIOINFORMATICS SESSION

(All are invited to attend)

March 19, 2010, Time: 8.30 AM – 11.30 AM
Organizer: Susmita Datta
Chair: Eric Rouchka

TIME

TITLE

SPEAKER

8:30 AM- 8:45 AM

Welcome
State of Bioinformatics in Kentucky

Nigel Cooper,
University of Louisville

8:45 AM- 9:00 AM

Computational Prediction of Genes Translationally Regulated by Cytoplasmic Polyadenylation Elements

Eric Rouchka,
University of Louisville

9:00 AM – 9:15 AM

Dealing with One Microarray Per Group

Arnold Stromberg,
University of Kentucky

9:15 AM – 9:30 AM

Improved Automated Monoisotopic Peak Detection Method for Mass Spectrometry Data

Susmita Datta,
University of Louisville

9:30 AM – 9:45 AM

Differential Network Analysis from Microarray Data using Partial Least Squares

Ryan Gill,
University of Louisville

9:45 AM – 10:00 AM

Assessment of Genetic Variation for the LINE-1 Retrotransposon from Next
Generation Sequence Data

Theodore Kalbfleisch,
University of Louisville

10:00 AM – 10:15 AM

Development of Metabolomic Profiling Pipeline for Disease Biomarker Discovery

Xiang Zhang,
University of Louisville

10:15 AM – 10:30 AM

Biological Impacts of Missing Value Imputation on Down-stream  Analyses in Microarray Data

Guy Brock,
University of Louisville

10:30 AM – 10:45 AM

Statistical Phylogenetic Analysis for Codivergence

Ruriko Yoshida,
University of Kentucky

10:45 AM – 11:05 AM

Modeling Terminal Differentiation of Mammalian Cells

Douglas Darling and Jiaxu Li,
University of Louisville

11:05 AM – 11:30 AM

Open Discussion and Closing Remarks

 

 

NOTE:  All times in Central Daylight Time (CDT)